Serveur d'exploration Cyberinfrastructure

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Data Standards for Omics Data: The Basis of Data Sharing and Reuse

Identifieur interne : 000707 ( Main/Exploration ); précédent : 000706; suivant : 000708

Data Standards for Omics Data: The Basis of Data Sharing and Reuse

Auteurs : Stephen A. Chervitz ; Eric W. Deutsch ; Dawn Field ; Helen Parkinson ; John Quackenbush ; Phillipe Rocca-Serra ; Susanna-Assunta Sansone ; Christian J. Stoeckert ; Chris F. Taylor ; Ronald Taylor ; Catherine A. Ball

Source :

RBID : PMC:4152841

Abstract

To facilitate sharing of Omics data, many groups of scientists have been working to establish the relevant data standards. The main components of data sharing standards are experiment description standards, data exchange standards, terminology standards, and experiment execution standards. Here we provide a survey of existing and emerging standards that are intended to assist the free and open exchange of large-format data.


Url:
DOI: 10.1007/978-1-61779-027-0_2
PubMed: 21370078
PubMed Central: 4152841


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Data Standards for Omics Data: The Basis of Data Sharing and Reuse</title>
<author>
<name sortKey="Chervitz, Stephen A" sort="Chervitz, Stephen A" uniqKey="Chervitz S" first="Stephen A." last="Chervitz">Stephen A. Chervitz</name>
</author>
<author>
<name sortKey="Deutsch, Eric W" sort="Deutsch, Eric W" uniqKey="Deutsch E" first="Eric W." last="Deutsch">Eric W. Deutsch</name>
</author>
<author>
<name sortKey="Field, Dawn" sort="Field, Dawn" uniqKey="Field D" first="Dawn" last="Field">Dawn Field</name>
</author>
<author>
<name sortKey="Parkinson, Helen" sort="Parkinson, Helen" uniqKey="Parkinson H" first="Helen" last="Parkinson">Helen Parkinson</name>
</author>
<author>
<name sortKey="Quackenbush, John" sort="Quackenbush, John" uniqKey="Quackenbush J" first="John" last="Quackenbush">John Quackenbush</name>
</author>
<author>
<name sortKey="Rocca Serra, Phillipe" sort="Rocca Serra, Phillipe" uniqKey="Rocca Serra P" first="Phillipe" last="Rocca-Serra">Phillipe Rocca-Serra</name>
</author>
<author>
<name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna-Assunta" last="Sansone">Susanna-Assunta Sansone</name>
</author>
<author>
<name sortKey="Stoeckert, Christian J" sort="Stoeckert, Christian J" uniqKey="Stoeckert C" first="Christian J." last="Stoeckert">Christian J. Stoeckert</name>
</author>
<author>
<name sortKey="Taylor, Chris F" sort="Taylor, Chris F" uniqKey="Taylor C" first="Chris F." last="Taylor">Chris F. Taylor</name>
</author>
<author>
<name sortKey="Taylor, Ronald" sort="Taylor, Ronald" uniqKey="Taylor R" first="Ronald" last="Taylor">Ronald Taylor</name>
</author>
<author>
<name sortKey="Ball, Catherine A" sort="Ball, Catherine A" uniqKey="Ball C" first="Catherine A." last="Ball">Catherine A. Ball</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">21370078</idno>
<idno type="pmc">4152841</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4152841</idno>
<idno type="RBID">PMC:4152841</idno>
<idno type="doi">10.1007/978-1-61779-027-0_2</idno>
<date when="2011">2011</date>
<idno type="wicri:Area/Pmc/Corpus">000461</idno>
<idno type="wicri:Area/Pmc/Curation">000461</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000520</idno>
<idno type="wicri:Area/Ncbi/Merge">000201</idno>
<idno type="wicri:Area/Ncbi/Curation">000201</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000201</idno>
<idno type="wicri:doubleKey">1064-3745:2011:Chervitz S:data:standards:for</idno>
<idno type="wicri:Area/Main/Merge">000709</idno>
<idno type="wicri:Area/Main/Curation">000707</idno>
<idno type="wicri:Area/Main/Exploration">000707</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Data Standards for Omics Data: The Basis of Data Sharing and Reuse</title>
<author>
<name sortKey="Chervitz, Stephen A" sort="Chervitz, Stephen A" uniqKey="Chervitz S" first="Stephen A." last="Chervitz">Stephen A. Chervitz</name>
</author>
<author>
<name sortKey="Deutsch, Eric W" sort="Deutsch, Eric W" uniqKey="Deutsch E" first="Eric W." last="Deutsch">Eric W. Deutsch</name>
</author>
<author>
<name sortKey="Field, Dawn" sort="Field, Dawn" uniqKey="Field D" first="Dawn" last="Field">Dawn Field</name>
</author>
<author>
<name sortKey="Parkinson, Helen" sort="Parkinson, Helen" uniqKey="Parkinson H" first="Helen" last="Parkinson">Helen Parkinson</name>
</author>
<author>
<name sortKey="Quackenbush, John" sort="Quackenbush, John" uniqKey="Quackenbush J" first="John" last="Quackenbush">John Quackenbush</name>
</author>
<author>
<name sortKey="Rocca Serra, Phillipe" sort="Rocca Serra, Phillipe" uniqKey="Rocca Serra P" first="Phillipe" last="Rocca-Serra">Phillipe Rocca-Serra</name>
</author>
<author>
<name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna-Assunta" last="Sansone">Susanna-Assunta Sansone</name>
</author>
<author>
<name sortKey="Stoeckert, Christian J" sort="Stoeckert, Christian J" uniqKey="Stoeckert C" first="Christian J." last="Stoeckert">Christian J. Stoeckert</name>
</author>
<author>
<name sortKey="Taylor, Chris F" sort="Taylor, Chris F" uniqKey="Taylor C" first="Chris F." last="Taylor">Chris F. Taylor</name>
</author>
<author>
<name sortKey="Taylor, Ronald" sort="Taylor, Ronald" uniqKey="Taylor R" first="Ronald" last="Taylor">Ronald Taylor</name>
</author>
<author>
<name sortKey="Ball, Catherine A" sort="Ball, Catherine A" uniqKey="Ball C" first="Catherine A." last="Ball">Catherine A. Ball</name>
</author>
</analytic>
<series>
<title level="j">Methods in molecular biology (Clifton, N.J.)</title>
<idno type="ISSN">1064-3745</idno>
<idno type="eISSN">1940-6029</idno>
<imprint>
<date when="2011">2011</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p id="P1">To facilitate sharing of Omics data, many groups of scientists have been working to establish the relevant data standards. The main components of data sharing standards are experiment description standards, data exchange standards, terminology standards, and experiment execution standards. Here we provide a survey of existing and emerging standards that are intended to assist the free and open exchange of large-format data.</p>
</div>
</front>
</TEI>
<affiliations>
<list></list>
<tree>
<noCountry>
<name sortKey="Ball, Catherine A" sort="Ball, Catherine A" uniqKey="Ball C" first="Catherine A." last="Ball">Catherine A. Ball</name>
<name sortKey="Chervitz, Stephen A" sort="Chervitz, Stephen A" uniqKey="Chervitz S" first="Stephen A." last="Chervitz">Stephen A. Chervitz</name>
<name sortKey="Deutsch, Eric W" sort="Deutsch, Eric W" uniqKey="Deutsch E" first="Eric W." last="Deutsch">Eric W. Deutsch</name>
<name sortKey="Field, Dawn" sort="Field, Dawn" uniqKey="Field D" first="Dawn" last="Field">Dawn Field</name>
<name sortKey="Parkinson, Helen" sort="Parkinson, Helen" uniqKey="Parkinson H" first="Helen" last="Parkinson">Helen Parkinson</name>
<name sortKey="Quackenbush, John" sort="Quackenbush, John" uniqKey="Quackenbush J" first="John" last="Quackenbush">John Quackenbush</name>
<name sortKey="Rocca Serra, Phillipe" sort="Rocca Serra, Phillipe" uniqKey="Rocca Serra P" first="Phillipe" last="Rocca-Serra">Phillipe Rocca-Serra</name>
<name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna-Assunta" last="Sansone">Susanna-Assunta Sansone</name>
<name sortKey="Stoeckert, Christian J" sort="Stoeckert, Christian J" uniqKey="Stoeckert C" first="Christian J." last="Stoeckert">Christian J. Stoeckert</name>
<name sortKey="Taylor, Chris F" sort="Taylor, Chris F" uniqKey="Taylor C" first="Chris F." last="Taylor">Chris F. Taylor</name>
<name sortKey="Taylor, Ronald" sort="Taylor, Ronald" uniqKey="Taylor R" first="Ronald" last="Taylor">Ronald Taylor</name>
</noCountry>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Ticri/CIDE/explor/CyberinfraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000707 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000707 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Ticri/CIDE
   |area=    CyberinfraV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     PMC:4152841
   |texte=   Data Standards for Omics Data: The Basis of Data Sharing and Reuse
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:21370078" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a CyberinfraV1 

Wicri

This area was generated with Dilib version V0.6.25.
Data generation: Thu Oct 27 09:30:58 2016. Site generation: Sun Mar 10 23:08:40 2024